QUOTE(Raptor X7 @ Oct 11 2007, 02:52 PM)

Nice thread, it will be nice actually discussing science rather than arguing about it for once. I've got three questions:
1. How are behavioural traits (i.e. instincts) inherited?
2. How do environmental factors trigger various morphs within a species, as in phenotypic plasticity?
3. How does the body go about rebuilding muscle if there's insufficient protein available?
The incubation temperature of the eggs of certain species of reptiles can determine what the sex of the individual will be, is that technically an example of phenotypic plasticity?
EDIT: Added third question.
I will answer to the best of my ability, but I am going to hope Cimber comes to give you more detail if you need it.
1. Firstly lets define instinct. An instinct (too put it simply) is a behavior which is inherited and requires no learning for an organism to be capable of doing it. How developed an organisms brain is at birth, correlates to the amount of instinct (unlearned behaviors) it has. We know brain development is ultimately controlled by an organisms genes. So the genes responsible for brain development are likely responsible (at least partly) for unlearned behaviors. I am willing to bet that maternal RNA's also play a crucial role in instinct. We see mRNA's being responsible for things such as biological symmetry, determining ventral vs dorsal etc.
In the case of humans, we are born with little instincts. A human baby is born into the world at the mercy of it's caretakers. It takes some over a year to learn to walk. Most animal babies are up and walking around within days of their birth.
Also, I think many times "instinct" is misinterpreted. Say a social animal like a Chimp. You would think that a chimp has the behavioral instincts to interact in chimp society. This is not the case, this interaction is a learned behavior. There have been some garden experiments done to verify this (though experiments like this are not done much anymore). The basic premise being if you take a chimp from birth and remove it from any kind of social contact, then attempt to reintegrate it back into a chimp society it will not know how to interact.
Anyway, I would say instincts are inherited as genes that control the brain and also a given rise to by maternal RNA's or the environment of the womb (the latter not being inheritance). Though I am sure Cimber can elaborate more?
2. It depends on what we are talking about is how the trigger is accepted. I think this would be best illustrated with examples, but first lets define again.
We can say phenotypic plasticity is the ability of a single genotype to express different phenotypes depending on varying environmental conditions.
An example of this is sex changes. Some animals, when faced with low numbers of one sex, are able to change to the opposite sex.
Another great example is beetle horns. The length of a beetles horn is dependent upon nutritional availability during the larval stage. Particularly there is a sensitive period at the end of the larval stage. In this example, nutrition mediates developmental proteins which effect the length of the horn.
For a detailed explanation click
HERESo really it depends on what morph we are talking about for what species.
3. Simple, It doesn't. Proteins are constructed by amino acids. Some amino acids we can make, some we require. That is why we need to ingest protein, to provide us with amino acids we can not manufacture. If you experience a protein deficiency it is because your body lacks the relevant amino acids to manufacture and repair.
To the last question I believe that is an example of gene-environment interaction and not phenotypic plasticity (Though I could be wrong). Gene-environment interaction means the phenotype of all organisms is a result of the environment interacting with one’s genes. Neither produces a trait without the effect of the other. A great example of this is the coat color of Siamese cats. Siamese cats have a light colored body and darker colored paws, ears, tail, and face. A mutation in one of the genes that produces pigment in Siamese cats only works well at cool temperature. Since the skin over the extremities is cooler than the body, those areas are usually darker.